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UCSC Genome Browser Downloads
Download genomic sequences and annotations for various species from the UCSC Genome Browser. Access data for research via web, API, or FTP.
Download genomic data for research and analysis
The UCSC Genome Browser Downloads page gives you access to a wide range of genomic sequences and annotation data for humans, mice, SARS-CoV-2, and many other organisms. You can easily download genome assemblies and related files straight from the web, or connect via API, MySQL, or FTP for more advanced access.\n\nIf you're working in genomics, bioinformatics, or related research, this site provides the essential datasets you need, including sequence files, annotations, alignments, and more. You can filter and select data through user-friendly tools like the Table Browser or use command-line utilities for custom needs.\n\nWhether you're a researcher, educator, or student, the site makes it simple to access up-to-date genomic information and resources for your projects. Helpful links, documentation, and support are available to guide you through downloading and using the data.
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Access and share genomic data on viruses like influenza and COVID-19. GISAID supports global research and public health collaboration.
PhysioNet offers free access to complex physiologic signal data and tools, supporting research and collaboration in biomedical and health science fields.
Access NASA's Planetary Data System for planetary science research, with streamlined tools and easy data downloads for scientists and enthusiasts.
Find and explore rat genomic, genetic, and disease data, plus analysis tools and resources for researchers in genetics and biomedical science.
Explore human gene expression and regulation across tissues with open-access data, visualizations, and resources from the Genotype-Tissue Expression (GTEx) project.
Explore and download large-scale functional genomics data, browse experiments, and access research tools for studying human and mouse genomics.
Explore cancer genomics data, tools, and resources to support cancer research and discovery, provided by the NCI Genomic Data Commons.
Explore, browse, and download network datasets for scientific research and analysis on the UCI Network Data Repository website.
Explore and access 3D structures of proteins, nucleic acids, and complex assemblies in the global Protein Data Bank research archive.
Access a global archive of nucleotide sequence data, from raw reads to annotated sequences, for research and scientific collaboration worldwide.
Explore and request access to clinical biospecimens and study datasets for heart, lung, and blood research through this NIH-supported repository.
Access Swiss National Science Foundation research data, statistics, and reports through an organized portal for easy exploration and download.
Explore a curated database of ageing-related genes and longevity research, with tools to search genes, species, and scientific literature on human ageing.
An IT solution that helps researchers and administrators manage research data, track results, and allocate resources efficiently.
CAIDA offers network research, curated datasets, and tools for scientists and academics studying internet infrastructure and data analysis.
openICPSR lets you share and access behavioral health and social science research data for free, supporting open science and public research access.
Mendeley Data is a free, secure online repository for sharing, storing, and citing research data, helping you easily access and collaborate worldwide.
Browse and access a wide range of research datasets published by Elsevier, with search tools, citation options, and detailed data types for your studies.
IMGT offers expertly curated immunogenetics databases and online analysis tools for researchers studying antibodies, T cell receptors, and immune responses.
miRBase is an online database for searching and browsing microRNA sequences, letting you explore and download genetic information by organism or chromosome.
Explore UK public research projects, publications, and funding with Gateway to Research—an easy way to find people, outcomes, and organizations in science.
OMIM is a free, authoritative database of human genes and genetic disorders, offering detailed, up-to-date information for genetics research and medicine.
Explore data and resources on nonindigenous aquatic species in the US, including searchable databases, alerts, and scientific information.
Explore advanced research in computing sciences, data analysis, and mathematical modeling at Berkeley Lab, supporting breakthroughs in science and technology.
Explore comprehensive gene function data and annotations to support biological research, with tools for accessing, browsing, and contributing to gene ontology.
Explore how environmental chemicals impact human health with CTD, a research database linking chemicals, genes, and diseases for scientific discovery.
Explore protein domains, families, and functional sites with PROSITE, a research database for identifying protein patterns and profiles in biology.
BindingDB is a database of measured protein–ligand binding affinities, helping researchers find and analyze chemical and biological interaction data.
BioGRID is a free online database offering searchable and downloadable data on protein, genetic, and chemical interactions across major model organisms.
Explore and access a wide range of biomedical ontologies and vocabularies to support research, data sharing, and collaboration in life sciences.
Worldwide Hgdownload.soe.ucsc.edu Alternatives
DataONE connects you to a vast network of Earth and environmental data, offering tools and training to help researchers access, share, and manage data.
Access cross-national microdata for research and analysis with remote tools from the LIS Data Center in Luxembourg. Ideal for social science studies.
Bio2RDF links and shares life sciences datasets, letting you search, query, and download biological data for research and discovery.
Explore detailed information on human metabolites, diseases, proteins, and pathways with this comprehensive research database for metabolomics studies.
Explore detailed data on all human proteins in cells and tissues, with powerful search and visualization tools for research and discovery.
Explore protein structures predicted by AlphaFold. Search, browse, and download detailed 3D models to support scientific research and discovery.
Explore a comprehensive genome taxonomy database for bacteria and archaea, offering standardized classification and phylogenetic tools for researchers.
Explore and access public research data on human brain connections, including studies on brain health, development, aging, and related diseases.
MycoBank is an online database for fungal taxonomy, offering detailed information about fungi species, names, and related scientific data.
Access open, curated databases of microbial genome sequences and typing data for over 140 species, including provenance and phenotype information.
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