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ENCODE
Explore and download large-scale functional genomics data, browse experiments, and access research tools for studying human and mouse genomics.
Browse and analyze functional genomics data
ENCODE is a comprehensive online resource where you can explore, search, and download functional genomics data related to human and mouse biology. Whether you’re interested in specific experiments, cell types, or large-scale datasets, the site offers organized access to a wide range of research materials, including single-cell experiments and epigenomic maps.
You can browse experiment matrices, use the encyclopedia browser, and access specialized collections such as RNA-protein interactions or Alzheimer’s disease studies. The platform is ideal for researchers, students, and anyone curious about genomics, offering tools and cloud resources to make working with big biological data easier.
ENCODE also provides helpful guides and materials to support your research, along with community features and up-to-date publications. Signing up for an account allows you to save searches and access personalized features, making your genomics research more efficient and collaborative.
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Explore and access 3D structures of proteins, nucleic acids, and complex assemblies in the global Protein Data Bank research archive.
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Access a global archive of nucleotide sequence data, from raw reads to annotated sequences, for research and scientific collaboration worldwide.
Explore and request access to clinical biospecimens and study datasets for heart, lung, and blood research through this NIH-supported repository.
Explore cancer genomics data, tools, and resources to support cancer research and discovery, provided by the NCI Genomic Data Commons.
Access and share genomic data on viruses like influenza and COVID-19. GISAID supports global research and public health collaboration.
PhysioNet offers free access to complex physiologic signal data and tools, supporting research and collaboration in biomedical and health science fields.
Access NASA's Planetary Data System for planetary science research, with streamlined tools and easy data downloads for scientists and enthusiasts.
Download genomic sequences and annotations for various species from the UCSC Genome Browser. Access data for research via web, API, or FTP.
DataONE connects you to a vast network of Earth and environmental data, offering tools and training to help researchers access, share, and manage data.
Explore human gene expression and regulation across tissues with open-access data, visualizations, and resources from the Genotype-Tissue Expression (GTEx) project.
Access Swiss National Science Foundation research data, statistics, and reports through an organized portal for easy exploration and download.
An IT solution that helps researchers and administrators manage research data, track results, and allocate resources efficiently.
Explore comprehensive gene function data and annotations to support biological research, with tools for accessing, browsing, and contributing to gene ontology.
Explore how environmental chemicals impact human health with CTD, a research database linking chemicals, genes, and diseases for scientific discovery.
Explore protein domains, families, and functional sites with PROSITE, a research database for identifying protein patterns and profiles in biology.
BindingDB is a database of measured protein–ligand binding affinities, helping researchers find and analyze chemical and biological interaction data.
BioGRID is a free online database offering searchable and downloadable data on protein, genetic, and chemical interactions across major model organisms.
Explore and access a wide range of biomedical ontologies and vocabularies to support research, data sharing, and collaboration in life sciences.
Explore detailed data on all human proteins in cells and tissues, with powerful search and visualization tools for research and discovery.
Explore protein structures predicted by AlphaFold. Search, browse, and download detailed 3D models to support scientific research and discovery.
Explore a comprehensive genome taxonomy database for bacteria and archaea, offering standardized classification and phylogenetic tools for researchers.
Explore and access public research data on human brain connections, including studies on brain health, development, aging, and related diseases.
MycoBank is an online database for fungal taxonomy, offering detailed information about fungi species, names, and related scientific data.
Access open, curated databases of microbial genome sequences and typing data for over 140 species, including provenance and phenotype information.
FAIRsharing helps you find, share, and cite data standards, databases, and policies for research across disciplines.
Explore global species taxonomy with ITIS, an open database offering scientific names and classifications for plants, animals, and other organisms.
Explore protein structures and classifications with CATH, a database for researchers studying protein sequences, structures, and their relationships.
Explore detailed microarray gene expression data from the human brain, including interactive heatmaps and search tools for neuroscience research.
Explore detailed data on protein-coding gene families, their functions, and genetic variations to support biomedical and evolutionary research.
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Explore, browse, and download network datasets for scientific research and analysis on the UCI Network Data Repository website.
Find and explore rat genomic, genetic, and disease data, plus analysis tools and resources for researchers in genetics and biomedical science.
Explore detailed information on human metabolites, diseases, proteins, and pathways with this comprehensive research database for metabolomics studies.
BioNames connects taxonomic names to original descriptions, taxa, and phylogenies, making it easy to explore scientific naming information online.
Explore a global database of fungal species, offering taxonomic information and datasets for researchers, scientists, and anyone interested in mycology.
Explore a specialized database of bitter compounds, their structures, and related scientific data. Designed for researchers in biochemistry and food science.
Explore integrated cross-species gene, variant, and disease data to support research and discovery in genetics and biomedical science.
BRENDA is a comprehensive enzyme database offering detailed biochemical, molecular, and functional data for researchers in biology and life sciences.
Avibase is a comprehensive world bird database where you can search, compare, and manage bird species information, checklists, and taxonomies.
Find and access NASA-funded scientific and technical information through an easy-to-search repository of research reports and publications.
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